Hi All
 
I am trying to build the test annotation package from the AnnBuilder
primer but I keep getting an "invald class "GO" object" error.  
The code I am using is straight from the vignette with a couple of
modifications for path and package naming
 
>library(AnnBuilder)
>datadir <- "/rc2/current project storage/RCAnnotation"
>setwd(datadir)
 
>myDir <- tempdir()
>myBase <- file.path(.path.package("AnnBuilder"), "data", "thgu95a")
>myBaseType="gb"
>mySrcUrls <- getOption("AnnBuilderSourceUrls")
>myOtherSrc <- c(srcone = file.path(.path.package("AnnBuilder"), "data",
"srca"), srctwo = file.path(.path.package("AnnBuilder"), "data",
"srcb"))

>ABPkgBuilder(baseName = myBase, srcUrls = mySrcUrls, baseMapType =
myBaseType,
+otherSrc = myOtherSrc, pkgName = "myPkg", pkgPath = myDir,
+organism = "Homo sapiens", version = "1.1.0", 
+author = list(author = "myname", maintainer = "myname@myemail.com"),
+fromWeb = TRUE)
 
 
From here ABPkgBuilder downloads gene2accession.gz, runs gzip and dumps
out with the following error:
 
>Error in validObject(.Object) : invalid class "GO" object: invalid
object for slot "srcUrl" in class "GO": got class "list", should be or
extend class "character"

System:
 
Windows XP
R 2.1.1
Current release of BioC packages (downloaded via getBioC yesterday)
 
Any ideas?
 
Thanks
Barry

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