[BioC] Package "makecdfenv"

[James W. MacDonald]

Hi Romain,

I am cc'ing the Bioconductor list, which is the primary place to ask 
these sorts of questions.


On Thursday, May 22, 2014 8:46:39 AM, Romain Desert wrote:
> Dear Mr MacDonald,
>
> I curantly work on a custom affymetrix data chip from GEO. To process
> CEL files with the "affy" package on R, I have to create a custom
> package. To this end, I used the "make.cdf.package" function of the
> "makecdfenv" package.
>
> Unfortunately, I am now incapable to install the created package. I
> don't work on linux so I can't use 'R CMD INSTALL'.

This is something I need to fix. You can install the package on 
Windows, regardless, using

install.packages(<package name goes here>, repos = NULL, type = 
"source")

and since there is no compiled code, it will be installed without 
problems.

Best,

Jim


>
> make.cdf.env didn't worked either. Maybe I don't know how to use it in
> a good way.
>
> Could you give me some advices?
> Thank you in advance.
>

--
James W. MacDonald, M.S.
Biostatistician
University of Washington
Environmental and Occupational Health Sciences
4225 Roosevelt Way NE, # 100
Seattle WA 98105-6099