[BioC] Ontology

Steve Lianoglou lianoglou.steve at gene.com
Fri Jan 31 19:24:03 CET 2014


On Fri, Jan 31, 2014 at 9:16 AM, Orçun Haçarız [guest]
<guest at bioconductor.org> wrote:
> Dear,
> I would like to categorise a large number of sequences (100-400 bp) (about forty thousands) based on ontology (such as biological process, molecular function, cellular component).  Please, could you inform me that which programme(s) in your website could be suitable for that?

Perhaps it is clear to others, but I'm not sure how one goes about
assigning function to a sequence in the absence of anything else?

Where are these sequences coming from?

Can you give more detail about what sort of sequences you are talking
about and what sorts of "functionality" you want to attribute to them?
And by what means it is valid to do so?


Steve Lianoglou
Computational Biologist

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