[BioC] maQualityPlots: cannot coerce type 'S4' to vector of type 'double'
Saket Choudhary
saketkc at gmail.com
Wed Jan 22 14:28:02 CET 2014
I am using arrayQuality and beta7 packages to get an overview of
Quality Analysis:
> library(arrayQuality)
> library(beta7)
Loading required package: marray
Loading required package: limma
> maQualityPlots(beta7)
Error in as.double(y) :
cannot coerce type 'S4' to vector of type 'double'
>
> sessionInfo()
R version 3.0.2 (2013-09-25)
Platform: x86_64-pc-linux-gnu (64-bit)
locale:
[1] LC_CTYPE=en_IN LC_NUMERIC=C LC_TIME=en_IN
[4] LC_COLLATE=en_IN LC_MONETARY=en_IN LC_MESSAGES=en_IN
[7] LC_PAPER=en_IN LC_NAME=C LC_ADDRESS=C
[10] LC_TELEPHONE=C LC_MEASUREMENT=en_IN LC_IDENTIFICATION=C
attached base packages:
[1] stats graphics grDevices utils datasets methods base
other attached packages:
[1] beta7_1.0.6 marray_1.40.0 limma_3.18.9
[4] arrayQuality_1.40.0
loaded via a namespace (and not attached):
[1] grid_3.0.2 gridBase_0.4-6 hexbin_1.26.3 lattice_0.20-24
[5] RColorBrewer_1.0-5
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