[BioC] ggvis: interactive heatmaps

[James W. MacDonald]

Hi Abhi,

Have you tried Epivizr? I haven't done much with that package, but it might
be more useful for what you are trying to do.

Best,

Jim




On Mon, Aug 18, 2014 at 7:17 PM, Abhishek Pratap <abhishek.vit at gmail.com>
wrote:

> Hi Steve
>
> I should have mentioned that I am using shiny interface to give user
> some options to do data filtering. I am interested in finding if there
> are tools that can help me get tootip and brushing capability. What I
> mean by brushing is to select subset of the data from the heatmap
> directly and tooltip to give the user point level info on the heatmap.
>
> Cheers!
> -Abhi
>
> On Mon, Aug 18, 2014 at 3:55 PM, Steve Lianoglou
> <lianoglou.steve at gene.com> wrote:
> > Hi,
> >
> > On Mon, Aug 18, 2014 at 3:49 PM, Abhishek Pratap <abhishek.vit at gmail.com>
> wrote:
> >> Just wondering if someone knows or have come up with an implementation
> >> of interactive heatmap using ggvis. Any other tools/pointers welcome
> >
> > I wasn't there myself, but I think the RStudio/shiny folks presented
> > something like this at the bioc conference last year ... namely:
> >
> >
> http://www.bioconductor.org/help/course-materials/2013/BioC2013/ShinyInBioinformatics.pdf
> >
> > HTH,
> > -steve
> >
> > --
> > Steve Lianoglou
> > Computational Biologist
> > Genentech
>
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-- 
James W. MacDonald, M.S.
Biostatistician
University of Washington
Environmental and Occupational Health Sciences
4225 Roosevelt Way NE, # 100
Seattle WA 98105-6099

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