[BioC] chip removal from lumiBatch object
Kilo Morkowi
kilo.morkowi at yandex.ru
Fri Aug 1 00:09:05 CEST 2014
Hi,
I wil be very grateful if you could advise me on how can I correctly remove an outlier chip from llumiBatch object.
For instance, let's assume that B01 sample in lumiBarnes example is an outlier. I'd like to remove it before normalization.
How can this be done? Is here a method for deleting a chip?
Many thanks for your help,
--- Anastasia
ps.
I have imported data with lumiR function, added control info, modified phenoData, and made QC and plots.
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