[BioC] problem to install package CORNA

[Dan Tenenbaum]

Hi Martin,


----- Original Message -----
> From: "Martin Leonardo" <Leonardo.Martin at nvh.no>
> To: bioconductor at r-project.org
> Sent: Thursday, September 12, 2013 3:26:12 AM
> Subject: [BioC] problem to install package CORNA
> 
> Hi!! Everyone,
> 
> I am trying to test a gene list for over-representation of
> microRNA-target associations using the package CORNA available from:
>  http://corna.sourceforge.net, unfortunately the version in the site
> given by the authors does not run properly in R 3. 0. 1 because was
> built before. My question is can someone tell me if there is an
> updated version of this package, I could not find another one. Also,
> can someone suggest me other useful package for my purpose.

I'm not sure about other packages. CORNA is not a Bioconductor package.
You might try downloading and installing the .tar.gz file (not the .zip file).

Dan


> Best regards.
> Leonardo.
> library (CORNA)
> Error: package 'CORNA' was built before R 3.0.0: please re-install it
> 
> > sessionInfo ()
> R version 3.0.1 (2013-05-16)
> Platform: x86_64-w64-mingw32/x64 (64-bit)
> 
> locale:
> [1] LC_COLLATE=Norwegian (Bokm�l)_Norway.1252  LC_CTYPE=Norwegian
> (Bokm�l)_Norway.1252    LC_MONETARY=Norwegian (Bokm�l)_Norway.1252
> LC_NUMERIC=C                               LC_TIME=Norwegian
> (Bokm�l)_Norway.1252
> 
> attached base packages:
> [1] stats     graphics  grDevices utils     datasets  methods   base
> >
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