[BioC] Unable to load xps

[Jorge Melendez]

Hello Christian
Thanks for the quick response!
Yes, I am using root_v5.34.05.macosx64-10.8-i386.tar
Best
Jorge

On Tue, Sep 10, 2013 at 10:29 AM, cstrato <cstrato at aon.at> wrote:
> Dear Jorge,
>
> Which file did you download from the ROOT website?
>
> Please note that the README file says:
>    For Mountain Lion there exists a 64 bit binary:
>    root_v5.34.05.macosx64-10.8-i386.tar.gz
>
> Best regards,
> Christian
> _._._._._._._._._._._._._._._._._._
> C.h.r.i.s.t.i.a.n   S.t.r.a.t.o.w.a
> V.i.e.n.n.a           A.u.s.t.r.i.a
> e.m.a.i.l:        cstrato at aon.at
> _._._._._._._._._._._._._._._._._._
>
>
>
>
> On 9/10/13 5:04 PM, Jorge Melendez [guest] wrote:
>>
>> Hi!
>> As someone else on the list, I am having trouble loading xps in a mac. I
>> am using OSX 10.8, R 3.0.1.  I used the latest precompiled binary and
>> installed root at ~/my_rnaseq_exp/root. I changed my .bash_profile with
>> export ROOTSYS=/Users/jorgemelendez/my_rnaseq_exp/root
>> export PATH=$ROOTSYS/bin:$PATH
>> export LD_LIBRARY_PATH=$ROOTSYS/lib:$LD_LIBRARY_PATH
>> export DYLD_LIBRARY_PATH=$ROOTSYS/lib:$DYLD_LIBRARY_PATH
>> Root root runs fine, but when trying to load xps in R:
>>
>> Error in dyn.load(file, DLLpath = DLLpath, ...) :
>>    unable to load shared object
>> '/Library/Frameworks/R.framework/Versions/3.0/Resources/library/xps/libs/xps.so':
>>
>> dlopen(/Library/Frameworks/R.framework/Versions/3.0/Resources/library/xps/libs/xps.so,
>> 6): Library not loaded: @rpath/libGui.so
>>    Referenced from:
>> /Library/Frameworks/R.framework/Versions/3.0/Resources/library/xps/libs/xps.so
>>    Reason: image not found
>> Error: package or namespace load failed for ‘xps’
>>
>>
>> Can you help?
>> Thanks a lot
>>
>>   -- output of sessionInfo():
>>
>> R version 3.0.1 (2013-05-16)
>> Platform: x86_64-apple-darwin10.8.0 (64-bit)
>>
>> locale:
>> [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8
>>
>> attached base packages:
>> [1] stats     graphics  grDevices utils     datasets  methods   base
>>
>> loaded via a namespace (and not attached):
>> [1] tools_3.0.1
>>
>> --
>> Sent via the guest posting facility at bioconductor.org.
>>
>



-- 
Jorge Melendez Zajgla MD PhD
Functional Cancer Genomics Laboratory
Deputy Director of Basic Research
National Institute of Genomic Medicine
Mexico
Periférico Sur No. 4809, Col. Arenal Tepepan,
Delegación Tlalpan. México, D.F. C.P. 14610
Tel. 535019200 ext 1126