[BioC] longitudinal GWAS analysis

[Wolfgang Huber]

Dear Joao

would perhaps 'lm' and 'glm' from the 'stats' package be a good place to start?

	Best wishes
	Wolfgang

On 9 Sep 2013, at 17:26, Joao Fadista <joao.fadista at med.lu.se> wrote:

> Dear all,
> 
> I would like to know if there is any Bioconductor/R package that can deal with longitudinal GWAS analysis. Briefly, I have phenotypic data for some individuals (measured at different time points; not necessarily the same number of measures, so one individual can have 2 measures over time, while another might have 5). Then I want to analyze if that phenotype changes differently with time depending on the SNP genotype that I am testing. Thanks in advance.
> 
> Cheers,
> João
> 
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