[BioC] PWMEnrich binding site position
massimo acquaviva [guest]
guest at bioconductor.org
Fri Sep 6 09:43:45 CEST 2013
Hallo to everyone,
I'm using PWMEnrich to search for enriched TFBS in a list of FASTA sequences.
I can't understand how to extract the coordinates of the matches for the enriched motifs,
Any suggestion will be highly appreciated
Thank you in advance
Massimo Acquaviva
-- output of sessionInfo():
R version 2.15.2 (2012-10-26)
Platform: x86_64-w64-mingw32/x64 (64-bit)
locale:
[1] LC_COLLATE=Italian_Italy.1252 LC_CTYPE=Italian_Italy.1252
[3] LC_MONETARY=Italian_Italy.1252 LC_NUMERIC=C
[5] LC_TIME=Italian_Italy.1252
attached base packages:
[1] stats graphics grDevices utils datasets methods base
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