[BioC] Error in heatmapSig function
Maria Mengual [guest]
guest at bioconductor.org
Thu Oct 31 17:20:23 CET 2013
Hello,
This is my first time using R and HTqPCR package. I'm trying to do a miRNAs expression analysis.
I have a problem in the end of the analysis, I want to represent my significant different expression miRNAs in a HeatMap using heatmapSig function, but it isn't work.
These is my error:
heatmapSig(DCtnorm.ttest, comparison = "all", zero.center = TRUE)
Error in x$ddCt : $ operator is invalid for atomic vectors
Thank you!
Marìa
-- output of sessionInfo():
sessionInfo()
R version 3.0.2 (2013-09-25)
Platform: i386-w64-mingw32/i386 (32-bit)
locale:
[1] LC_COLLATE=Italian_Italy.1252 LC_CTYPE=Italian_Italy.1252
[3] LC_MONETARY=Italian_Italy.1252 LC_NUMERIC=C
[5] LC_TIME=Italian_Italy.1252
attached base packages:
[1] parallel stats graphics grDevices utils datasets methods
[8] base
other attached packages:
[1] HTqPCR_1.16.0 limma_3.18.1 RColorBrewer_1.0-5
[4] Biobase_2.22.0 BiocGenerics_0.8.0
loaded via a namespace (and not attached):
[1] affy_1.40.0 affyio_1.30.0 BiocInstaller_1.12.0
[4] bitops_1.0-6 caTools_1.16 gdata_2.13.2
[7] gplots_2.12.1 gtools_3.1.0 KernSmooth_2.23-10
[10] preprocessCore_1.24.0 stats4_3.0.2 tools_3.0.2
[13] zlibbioc_1.8.0
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