[BioC] RNAseq visualization tools

[Ryan]

If you want something that you can plot in a heatmap, you might try 
using DESeq2, which squeezes the log fold changes of low-abundance 
genes toward zero so that your heatmap is not dominated by small 
fluctuations in low-abundance genes.

On Mon Nov 25 14:22:02 2013, Claudio Isella wrote:
> dear BioC,
>
> could you suggest me a tool to RNAseq data upon differential expression analysis?
> as far as these data are not linear I am not sure if standard log2ratio and heat map are suitable.
>
>
>
> Claudio Isella
> claudio.isella at gmail.com
>
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