[BioC] Bioconductor CMA PLS DA
liz considine [guest]
guest at bioconductor.org
Wed Nov 13 15:42:38 CET 2013
Hi, I am trying to extract the VIP (variable importance of projection) scores from PLS DA analysis in Bioconductor CMA package. Thanks for any advice
-- output of sessionInfo():
> sessionInfo()
R version 3.0.2 (2013-09-25)
Platform: i386-w64-mingw32/i386 (32-bit)
locale:
[1] LC_COLLATE=Irish_Ireland.1252 LC_CTYPE=Irish_Ireland.1252
[3] LC_MONETARY=Irish_Ireland.1252 LC_NUMERIC=C
[5] LC_TIME=Irish_Ireland.1252
attached base packages:
[1] parallel stats graphics grDevices utils datasets methods base
other attached packages:
[1] impute_1.36.0 plsgenomics_1.2-6 MASS_7.3-29 CMA_1.20.0
[5] Biobase_2.22.0 BiocGenerics_0.8.0 BiocInstaller_1.12.0
loaded via a namespace (and not attached):
[1] tools_3.0.2
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