[BioC] Bioconductor CMA PLS DA

liz considine [guest] guest at bioconductor.org
Wed Nov 13 15:42:38 CET 2013

Hi, I am trying to extract the VIP (variable importance of projection) scores from PLS DA analysis in Bioconductor CMA package. Thanks for any advice

 -- output of sessionInfo(): 

> sessionInfo()
R version 3.0.2 (2013-09-25)
Platform: i386-w64-mingw32/i386 (32-bit)

[1] LC_COLLATE=Irish_Ireland.1252  LC_CTYPE=Irish_Ireland.1252   
[3] LC_MONETARY=Irish_Ireland.1252 LC_NUMERIC=C                  
[5] LC_TIME=Irish_Ireland.1252    

attached base packages:
[1] parallel  stats     graphics  grDevices utils     datasets  methods   base     

other attached packages:
[1] impute_1.36.0        plsgenomics_1.2-6    MASS_7.3-29          CMA_1.20.0          
[5] Biobase_2.22.0       BiocGenerics_0.8.0   BiocInstaller_1.12.0

loaded via a namespace (and not attached):
[1] tools_3.0.2

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