[BioC] getAnnMap: package hugene10stv1 not available
guest at bioconductor.org
Sun Nov 3 22:15:34 CET 2013
I'm trying to analyze some array data with Bioconductor and I receive the following errore when I try to filter with GeneFilter: Error: getAnnMap: package hugene10stv1 not available.
This is the script I'm currently using:
mydata <- ReadAffy()
eset <- rma(mydata)
Annotation is hugene10stv1. I have already installed hugene10stv1cdf and hugene10stv1probe packages but I receive the same error every time I try to filter my set.
Any help would be very much appreciated.
Thanks a lot
-- output of sessionInfo():
R version 3.0.2 (2013-09-25)
Platform: i386-w64-mingw32/i386 (32-bit)
 LC_COLLATE=Italian_Italy.1252 LC_CTYPE=Italian_Italy.1252
 LC_MONETARY=Italian_Italy.1252 LC_NUMERIC=C
attached base packages:
 parallel stats graphics grDevices utils datasets methods
other attached packages:
 hugene10stv1cdf_2.13.0 AnnotationDbi_1.24.0 genefilter_1.44.0
 affy_1.40.0 Biobase_2.22.0 BiocGenerics_0.8.0
loaded via a namespace (and not attached):
 affyio_1.30.0 annotate_1.40.0 BiocInstaller_1.12.0
 DBI_0.2-7 IRanges_1.20.4 preprocessCore_1.24.0
 RSQLite_0.11.4 splines_3.0.2 stats4_3.0.2
 survival_2.37-4 tools_3.0.2 XML_3.98-1.1
 xtable_1.7-1 zlibbioc_1.8.0
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