[BioC] custon Cdf file

[James W. MacDonald]

Hi Deepika,

On 5/29/2013 5:41 AM, deepika lakhwani wrote:
> hello,
>
> For the custom CDF file, i am using pdfInfoBuilder package but when i run
> it. i got error.
>
> Error in getClass(Class, where = topenv(parent.frame())) :
>    "AffyGenePDInfopkgSeed" is not a defined class
>
> can anyone tell me that how can i solve it.

You don't need to solve it. The required package has already been 
created and is on the BioC servers. So if you do

dat <- read.celfiles(list.celfiles())

after starting R in the directory that contains your CEL files, the 
correct file will be automatically downloaded and installed.

Best,

Jim


>
>
> regards
> deepika
>
> 	[[alternative HTML version deleted]]
>
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-- 
James W. MacDonald, M.S.
Biostatistician
University of Washington
Environmental and Occupational Health Sciences
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Seattle WA 98105-6099