[BioC] unimart web Service not available
Kathrin Otte [guest]
guest at bioconductor.org
Mon May 27 12:20:08 CEST 2013
Hi everybody,
since this weekend I can't no longer connect to uniprot Biomart services via biomaRt (which worked pretty fine before) receiving the following error:
> uni <- useMart("unimart",dataset="uniprot")
Fehler in useMart("unimart", dataset = "uniprot") :
Incorrect BioMart name, use the listMarts function to see which BioMart databases are available
In fact, unimart is missing from listMarts(). I tried with R 2.14.1 and biomaRt_2.10.0 and also R 3.0.1 and biomaRt 2.16.0 leading to the same result.
Any suggestions what is going on?
Thanks a lot for your help,
Kathrin
-- output of sessionInfo():
> sessionInfo()
R version 2.14.1 (2011-12-22)
Platform: x86_64-pc-linux-gnu (64-bit)
locale:
[1] LC_CTYPE=de_DE.UTF-8 LC_NUMERIC=C
[3] LC_TIME=de_DE.UTF-8 LC_COLLATE=de_DE.UTF-8
[5] LC_MONETARY=de_DE.UTF-8 LC_MESSAGES=de_DE.UTF-8
[7] LC_PAPER=C LC_NAME=C
[9] LC_ADDRESS=C LC_TELEPHONE=C
[11] LC_MEASUREMENT=de_DE.UTF-8 LC_IDENTIFICATION=C
attached base packages:
[1] stats graphics grDevices utils datasets methods base
other attached packages:
[1] biomaRt_2.10.0
loaded via a namespace (and not attached):
[1] RCurl_1.95-3 XML_3.95-0.1
--
Sent via the guest posting facility at bioconductor.org.
More information about the Bioconductor
mailing list