[BioC] Agilent 8x60K Gene Expression Package

[Gordon K Smyth]

Dear Vandana,

The limma User's Guide:

http://bioconductor.org/packages/2.12/bioc/vignettes/limma/inst/doc/usersguide.pdf

gives a complete worked example from start to finish using Agilent 4x44k 
arrays in Section 15.4 (page 108).  Agilent 8x60k arrays will probably 
work similarly.

Best wishes
Gordon

> Date: Sat, 4 May 2013 00:53:09 +0200
> From: Vandana Sandhu <vsandhu1987 at gmail.com>
> To: bioconductor at r-project.org
> Subject: [BioC]  Agilent 8x60K Gene Expression Package
>
> Hi,
>
> I am working on Agilent Single Color 8x60k microarray data for mRNA. Is 
> there any package to normalize like Agi4x44K package? else how I can 
> normalize and filter the data using R and bioconductor and which method 
> would you suggest for normalization.
>
> Vandana
>

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