[BioC] How to retrieve all GO terms at level 5 as well as their annotated genes

Peter Davidsen pkdavidsen at gmail.com
Fri Jun 21 11:28:29 CEST 2013


Dear list,

I'm looking for a way to get the names of all Gene Ontology terms for
Biological Processes at level 5 as well as the genes (human gene
symbols) annotated to each of the level 5 GO terms.

I have tried to query the DAVID knowledgebase, but the online tool
doesn't seem to respond to any requests. Hence, could anybody maybe
point me in the direction of a package that could provide me with the
same information?

Kind regards,
Peter



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