[BioC] Can we apply WGCNA to RNA-seq dataset?

faranak ratash420 at gmail.com
Mon Jul 8 15:46:08 CEST 2013



> 
> 
Dear Fernando,

I am wondering if you could understand if WGCNA package
 is reliable for clustering RNAseq data and if there is any 
normalization needed.
I have z-score normalized RNAseq data and I want to 
use this package,  but I am not sure if it works correctly or not.
Here is a link to a poster working on this matter.

http://www.stats.ox.ac.uk/__data/assets/pdf_file/
0012/8400/Arabidopsis_Networks.pdf


Please let me know if you have found the answer.
Thanks
Faranak



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