[BioC] xps- not being able to load

cstrato cstrato at aon.at
Sat Jul 6 16:54:08 CEST 2013


Dear Juehua Yu,

The error indicates that xps does not find ROOT.

Can you please tell me which version of ROOT you did compile? (Please 
note that version 5.99/02 does not exist.)

When compiling ROOT yourself I would suggest that you check first if 
typing 'root' in a new xterm (or Terminal) will start ROOT.

How did you install xps?
I would suggest to compile xps, e.g.:
R CMD INSTALL xps_1.20.2.tar.gz

Which version of X did you install?

Best regards,
Christian


On 7/6/13 3:19 AM, Juehua Yu wrote:
> Hi all,
>
> I have read all online instructions for how to install and load xps in R,
> but keep getting the following error:
>
> Error in dyn.load(file, DLLpath = DLLpath, ...) :
>    unable to load shared object
> '/Library/Frameworks/R.framework/Versions/3.0/Resources/library/xps/libs/xps.so':
>
> dlopen(/Library/Frameworks/R.framework/Versions/3.0/Resources/library/xps/libs/xps.so,
> 6): Library not loaded: @rpath/libGui.so
>    Referenced from:
> /Library/Frameworks/R.framework/Versions/3.0/Resources/library/xps/libs/xps.so
>    Reason: image not found
> Error: package or namespace load failed for ‘xps’
>
>
> Root has been built. 5.99/02
> R 3.0.1
> Mac 10.8.4
>
> Root installed in /users/juehuayu/Documents/root
> with ./configure macosx64
>
> Also, I generated a bashrc file in /users/juehuayu/Documents/root
> # .bashrc
>
>       # User specific aliases and functions
>
>       #svn
>       export PATH=$PATH:/usr/local/bin
>
>       # ROOT settings
>
>       export ROOTSYS=/users/juehuayu/Documents/root/root
>       export PATH=$ROOTSYS/bin:$PATH
>       export LD_LIBRARY_PATH=$ROOTSYS/lib:$LD_LIBRARY_PATH
>
>       # Source global definitions
>       if [ -f /etc/bashrc ]; then
>                . /etc/bashrc
>       fi
>
> Please help.
>
>
>
>
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