[BioC] DESeq package error

Steve Lianoglou mailinglist.honeypot at gmail.com
Wed Jan 9 17:06:05 CET 2013


Hi,

On Wed, Jan 9, 2013 at 11:01 AM, Fares Z. Najar, Ph.D. <fznajar at ou.edu> wrote:
> Hi Dan,
>
> Here is what I entered after I started "R":
>
>> source("http://bioconductor.org/biocLite.R")
>> biocLite("DESeq")
>     Using R version 2.10.1, biocinstall version 2.5.11.
>     Installing Bioconductor version 2.5 packages:
>     [1] "DESeq"
>     Please wait...
>
>
>     Warning message:
>     In getDependencies(pkgs, dependencies, available, lib) :
>       package 'DESeq' is not available

It's not available because your R version is very old.

Please upgrade to the newest R (2.15.2) and reinstall your
bioconductor stuffs ... all be well, soon.

-steve

-- 
Steve Lianoglou
Graduate Student: Computational Systems Biology
 | Memorial Sloan-Kettering Cancer Center
 | Weill Medical College of Cornell University
Contact Info: http://cbio.mskcc.org/~lianos/contact



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