[BioC] error message relating to png file when running maQualityPlots
Yanqing Hu [guest]
guest at bioconductor.org
Thu Jan 3 17:15:39 CET 2013
I'm using Rstudio on my Mac. When I ran the code maQualityPlots(beta7) in Chapter 4 of Bioinformatics and Computational Biology Solutions Using R and Bioconductor, I got the mesasge "Error in plot.new() : could not open file 'diagPlot.6Hs.195.1.png'". Does anyone know how to fix this problem? Thanks a lot!
-- output of sessionInfo():
R version 2.15.1 (2012-06-22)
Platform: x86_64-redhat-linux-gnu (64-bit)
locale:
[1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C
[3] LC_TIME=en_US.UTF-8 LC_COLLATE=en_US.UTF-8
[5] LC_MONETARY=en_US.UTF-8 LC_MESSAGES=en_US.UTF-8
[7] LC_PAPER=C LC_NAME=C
[9] LC_ADDRESS=C LC_TELEPHONE=C
[11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C
attached base packages:
[1] stats graphics grDevices utils datasets methods
[7] base
other attached packages:
[1] vsn_3.26.0 arrayQuality_1.36.0 beta7_1.0.4
[4] marray_1.36.0 cluster_1.14.2 BiocInstaller_1.8.2
[7] affycomp_1.34.0 affyPLM_1.34.0 preprocessCore_1.20.0
[10] gcrma_2.30.0 hgu133acdf_2.11.0 hgu95av2cdf_2.11.0
[13] AnnotationDbi_1.20.0 affydata_1.11.17 affy_1.36.0
[16] Biobase_2.18.0 BiocGenerics_0.4.0 class_7.3-5
[19] limma_3.14.3
loaded via a namespace (and not attached):
[1] affyio_1.26.0 Biostrings_2.26.1 DBI_0.2-5
[4] grid_2.15.1 gridBase_0.4-5 hexbin_1.26.0
[7] IRanges_1.16.2 lattice_0.20-10 parallel_2.15.1
[10] RColorBrewer_1.0-5 RSQLite_0.11.2 splines_2.15.1
[13] stats4_2.15.1 tools_2.15.1 zlibbioc_1.4.0
--
Sent via the guest posting facility at bioconductor.org.
More information about the Bioconductor
mailing list