[BioC] Visualization of alignments with mismatch bases
Julian Gehring
julian.gehring at gmail.com
Thu Feb 28 18:46:34 CET 2013
Hi,
Is there a good way to visualize aligned reads with mismatch bases
(SNPs) along the genome (similar to what one knows from the standard
genome browsers)?
'ggbio' came to my mind with which plotting a pile of reads is straight
forward. However, overlaying the mismatched bases for each reads seems
not that easy any more.
Does someone of you have a good way to do this or found another solution
that works for R/bioc?
Best wishes
Julian
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