[BioC] combining/merging several ExpressionSet objects from SCAN
Ryan C. Thompson
rct at thompsonclan.org
Fri Aug 9 21:14:08 CEST 2013
celfiles <- list.files(pattern=".*\\.CEL$")
scan.esets <- lapply(celfiles, SCAN)
scan.eset <- Reduce(combine, scan.esets)
I forget what package the "combine" function is from, but I assume it's
the same package that provides the ExpressionSet class.
On Fri 09 Aug 2013 12:11:05 PM PDT, Juliet Hannah wrote:
> All,
>
> SCAN outputs an ExpressionSet object for each CEL file. What is a nicer way
> to put them all into a matrix other than converting each one to a vector
> and then cbinding after each conversion?
>
> Thanks,
>
> Juliet
>
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>
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