[BioC] how to find sequence and promoters
James W. MacDonald
jmacdon at uw.edu
Fri Nov 30 22:24:20 CET 2012
Hi Leonor,
On 11/30/2012 2:45 PM, lcarvalh at btk.fi wrote:
>>> Hi i am new using bioconductor.i have a table that contains the
>> ensembl_gene_idm the hgnc_symbol and the illumina_humanwg_6_v2 among others.
> that i got by using this function from the biomart package, getBM().
>>> How can I know the sequence of the genes? and the promoters? is there an
>>> function that does that?
The getSequence() function in biomaRt will do that.
Best,
Jim
>>>
>>> Thank you,
>>> Leonor
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--
James W. MacDonald, M.S.
Biostatistician
University of Washington
Environmental and Occupational Health Sciences
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Seattle WA 98105-6099
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