[BioC] any package can be used to extract SNP from bam or pileup file

[Wang Peter]

this function can be realized by bcftools

but those tools have some problems

thank you

-- 
shan gao
Room 231(Dr.Fei lab)
Boyce Thompson Institute
Cornell University
Tower Road, Ithaca, NY 14853-1801
Office phone: 1-607-254-1267(day)
Official email:sg839 at cornell.edu
Facebook:http://www.facebook.com/profile.php?id=100001986532253