[BioC] EdgeR error message when using plotSmear (missing values)
anna [guest]
guest at bioconductor.org
Sun Nov 11 16:32:36 CET 2012
Dear all, at which step should I change my parameters to avoid this error message ?
> detags <- rownames(y)[as.logical(de)]
> plotSmear(lrt, de.tags=detags)
Erreur dans quantile.default(M, c(0.05, 0.95)) :
missing values and NaN's not allowed if 'na.rm' is FALSE
thanks,
anna
-- output of sessionInfo():
R version 2.15.1 (2012-06-22)
Platform: i386-pc-mingw32/i386 (32-bit)
locale:
[1] LC_COLLATE=French_France.1252 LC_CTYPE=French_France.1252
[3] LC_MONETARY=French_France.1252 LC_NUMERIC=C
[5] LC_TIME=French_France.1252
attached base packages:
[1] splines stats graphics grDevices utils datasets methods
[8] base
other attached packages:
[1] edgeR_3.0.0 limma_3.14.1
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