[BioC] pam implementation

James F. Reid reidjf at gmail.com
Mon Nov 5 10:53:42 CET 2012


Hi John,

On 05/11/12 09:42, John Lande wrote:
> thank you both for the answer.
>
> the point is that pamr lacks of a specific vignette as other bioc packages
> so I was wondering if it was discontinued somehow.
>
> is there around a tutorial that explains pipelines of analysis and
> functions?

see here
http://www-stat.stanford.edu/~tibs/PAM/Rdist/doc/readme.html

HTH,
J.

>
> bests
>
> On Fri, Nov 2, 2012 at 7:42 PM, Wolfgang Huber <whuber at embl.de> wrote:
>
>> John
>>
>> not sure what's your measure of "best", but the pamr package on CRAN is
>> the one from the authors.
>>
>>          Best wishes
>>          Wolfgang
>>
>> Il giorno Oct 29, 2012, alle ore 2:41 PM, John Lande <
>> john.lande77 at gmail.com> ha scritto:
>>
>>> dear all,
>>>
>>> what is the best implementation in R or Bioconductor of the PAM algorithm
>>> probosed by Tibshirani et colleague?
>>>
>>> best reguards
>>>
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>
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>
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