[BioC] error running makeProbePackage

[James W. MacDonald]

Hi Jian,

On 5/16/2012 2:27 PM, Zhang, Jian wrote:
> Hi,
>
> I try to use R-1.15.0 and Bionconductor 2.10 makeProbePackage() in AnnotationDbi to make probe package for a custom microarray.
> It worked on my Windows Vista machine,  but failed on my Windows 7 machine with the following message:
>
> Error in as.environment(pos) : using 'as.environment(NULL)' is defunct
>
> Does anyone have experience with this problem?  Any suggestion for solution is appreciated!

What is the output of sessionInfo()? AFAIK, as.environment(NULL) hasn't 
been used in a core BioC package for years - R-core deprecated and 
defuncteded (new word!) that paradigmatic use of as.environment before 2006!

Best,

Jim


>
> Jian Zhang
>
>
> 	[[alternative HTML version deleted]]
>
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-- 
James W. MacDonald, M.S.
Biostatistician
University of Washington
Environmental and Occupational Health Sciences
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Seattle WA 98105-6099