[BioC] how to unlist a list of GappedAlignments objects
Yue Li
gorillayue at gmail.com
Tue May 8 04:01:23 CEST 2012
Hi Steve,
That works wonderfully! Thank you so much!
Yue
On 2012-05-07, at 9:21 PM, Steve Lianoglou wrote:
> Hi,
>
> On Mon, May 7, 2012 at 7:27 PM, Yue Li <gorillayue at gmail.com> wrote:
>> Dear R experts,
>>
>> I wonder if anyone knows how to unlist a list of GappedAlignments objects.
>>
>> Simply using unlist does not work b/c each GappedAlignments element of the list is compound.
>>
>> A brute-force way is to run a for loop and use 'append' to append each element to a GappedAlignments object. But this way is painfully slow.
>
> Does something like this work?:
>
> R> unlisted <- do.call(c, your.gapped.alignment.list)
>
> -steve
>
> --
> Steve Lianoglou
> Graduate Student: Computational Systems Biology
> | Memorial Sloan-Kettering Cancer Center
> | Weill Medical College of Cornell University
> Contact Info: http://cbio.mskcc.org/~lianos/contact
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