[BioC] Error in reading 450k data using lumiMethyR

Khadeeja Ismail hajjja at yahoo.com
Tue Mar 13 12:24:30 CET 2012

khadeeja ismail <hajjja at ...> writes:

> Hi,
> Wondering if anyone else has come across this error or knows the cause of it.
> "Error in if (mm < 0.01) { : missing value where TRUE/FALSE needed"
> Encountered it while trying to read 450k raw data output from GenomeStudio
using the lumiMethyR function.
> The file 
> size is 3.8GB and it has data from 60 arrays. R processed it for quite some
time before it stopped, giving the
> error message. 

CORRECTION: the data is from 156 arrays, and not from 60. 


> Thanking you in advance,
> Khadeeja

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