[BioC] Unable to open database file, cummeRbund error.

[Hardcastle, Justin]

Hi,
I'm having an issue running cummeRbund on my cuffdiff output. CummeRbund is giving me a DB error and not creating the DB. The code and error are below.

library("cummeRbund")

dir = "~/Test"
outdir = "output/cuffdiff"
cuff <- readCufflinks(dir = file.path(dir, outdir), rebuild = TRUE)

The error given is

> cuff <- readCufflinks(dir = file.path(dir, outdir), rebuild = TRUE)
Creating database ~/Test/output/cuffdiff/cuffData.db
Error in sqliteNewConnection(drv, ...) : 
  RS-DBI driver: (could not connect to dbname:
unable to open database file
)

I am running cummeRbund 1.2.0, and Cufflinks 2.0.1.

Thanks for any help.