[BioC] RnaSeqTutorial Package

[spf385 [guest]]

Greetings, 

I'm working my way through the tutorials for several RNA-Seq packages in R / bioconductor (EdgeR, DESeq, DEXSeq, ShortReads, etc.); and I've somewhat backed up to using the package RnaSeqTutorial (EBI, October 2011; Nicolas Delhomme). 

As I work my way through the documentation I stumble at section 2.3 Loading the annotation. 

it provides, 

> library(BSgenome.Dmelanogaster.UCSC.dm3) 

and I get the error message: Error in library(BSgenome.Dmelanogaster.UCSC.dm3); there is no package called 'BSgenome.Dmelanogaster.UCSC.dm3' 

is the above a typo? and should it read something to the effect of 

>library(BSgenome) 

>Dmelano <- data(Dmelanogaster.UCSC.dm3, package = "BSgenome") 


Or is it that BSgenome is built under a different version of R? I have downloaded the source package and can locate said "Dmelanogaster.UCSC.dm3-seed" 

I can't seem to work my way through this step. Any suggestions? 


Thanks in advance. 

 -- output of sessionInfo(): 

> library(BSgenome.Dmelanogaster.UCSC.dm3) 

Error in library(BSgenome.Dmelanogaster.UCSC.dm3); there is no package called 'BSgenome.Dmelanogaster.UCSC.dm3' 


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