[BioC] ChIPpeakAnno

[Ou, Jianhong]

Hi Bogdan,

The output p-vlaue of makeVennDiagram is obtained from hypergeometric test.
You can try
> ?hyper
to get more info.

Yours sincerely,

Jianhong Ou

jianhong.ou at umassmed.edu


On Jul 10, 2012, at 2:40 PM, Bogdan Tanasa wrote:

> Dear all,
> 
> regarding the ChIPpeakAnno package, particularly on the "makeVennDiagram"
> function, please could you let me know on how the significance p-value of
> the intersected peaks is computed. thanks a lot,
> 
> Bogdan
> 
> 	[[alternative HTML version deleted]]
> 
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