[BioC] BIoconductor AMI with R version 2.15.1

[Dan Tenenbaum]

On Tue, Jul 10, 2012 at 11:42 AM, Dan Tenenbaum <dtenenba at fhcrc.org> wrote:
> Hi  Jeff,
>
> On Tue, Jul 10, 2012 at 11:35 AM, Jeff Knisley <knisleyj.etsu at gmail.com> wrote:
>> First off, thank you for not only the excellent bioconductor package, but
>> also for the AMI for EC2.  Although I primarily work with Python, I really
>> like bioconductor and use it quite a bit.
>>
>> I'm about to launch into another AMI-based project, however, and I noticed
>> that the AMI is R version 2.15.0, which is problematic because I need to
>> run Rcpp and need a couple of packages (e.g,. forecast) that use Rcpp,
>> which is now >= 2.15.1.
>>
>> So before I do a lot on my own, I was wondering (a) how best to upgrade
>> AMI to 2.15.1 ( I can log in with SSH )   and (b) if the Rstudio interface
>> will need to be reconfigured.
>
> I will update the Bioconductor 2.10 AMI to use R 2.15.1 and will post
> an updated AMI ID later today. (The Bioconductor 2.11 AMI already uses
> R 2.15.1).
>

The Bioconductor 2.10 AMI has been updated to use R 2.15.1 and all
installed packages have been updated to the most recent release
version. The new AMI-id is available on our AMI page:

http://bioconductor.org/help/bioconductor-cloud-ami/#ami_ids

Thanks,
Dan

> Thanks,
> Dan
>
>
>>
>> Just thought I'd ask first.
>>
>> Thanks!
>>
>> Jeff
>>
>>         [[alternative HTML version deleted]]
>>
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