[BioC] visualization of chromosome interactions

[Wolfgang Huber]

Bogdan Tanasa scripsit 01/25/2012 05:15 PM:
> Dear all,
>
> please could you recommend any R package where the
> interchromosomal interactions (by 3C method - chromatin conformation
> capture) could be visualized?
>
> thanks,
>
> Bogdan


Some simple visualisations of inter-chromosomal interaction patterns and 
associated example code are also in the vignette of the 
LiebermanAidenHiC2009 data package: 
http://www.bioconductor.org/packages/release/data/experiment/html/LiebermanAidenHiC2009.html

Best wishes
	Wolfgang

Wolfgang Huber
EMBL
http://www.embl.de/research/units/genome_biology/huber