[BioC] Rgraphviz installing problem
Martin Morgan
mtmorgan at fhcrc.org
Thu Jan 26 10:25:17 CET 2012
On 01/26/2012 01:10 AM, Alexandra Federer wrote:
> Hello,
>
> I want to install the Rgraphviz package on my windows 7 notebook. I saved
> the Rgraphviz package as a .zip file and installed it with the following
> output:
Hi Alexandra --
Use a current version of R (R-2.14)
See the package home page
http://bioconductor.org/packages/release/bioc/html/Rgraphviz.html
including the README file
http://bioconductor.org/packages/2.9/bioc/readmes/Rgraphviz/README
paying attention to the 'Using the Windows Binary' section.
If you still have difficulty, start a new R session and
(a) report the output of the R command
sessionInfo()
(b) copy and paste the results of the commands
source("http://bioconductor.org/biocLite.R")
biocLite("Rgraphviz")
(c) Report the output of the command
strsplit(Sys.getenv("PATH"), ";")
and verify that the entry corresponding to the Graphviz directory is
correct.
Martin
>
> Paket ‘Rgraphviz’ erfolgreich ausgepackt und MD5 Summen abgeglichen
>
> but then if i want to load the package with
> library(Rgraphviz)
> I get the output:
>
> Lade nötiges Paket: graph
> Lade nötiges Paket: grid
> Error : .onLoad in loadNamespace() fehlgechlagen, Details:
> Aufruf: Rgraphviz
> Fehler: value[[3L]](cond)
> Fehler: Laden von Paket/Namensraum für ‘Rgraphviz’ fehlgeschlagen
>
> I tried with
> browseVignettes(package=" Rgraphviz")
> but got the output:
>
> Fehler in find.package(package, lib.loc) :
> there is no package called ‘ Rgraphviz’
>
> I have really no idea what I should try. I would be very glad if someone
> could help me! Thanks!
>
> Alexandra
>
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>
>
>
>
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