[BioC] How to prepare Custom INPUT(DATA) files for GAGE Analysis and DO a BASIC GAGE analysis using those files

[Valerie Obenchain]

Hi Jung,

Please provide the code you've tried and the error you are seeing. For 
example, did you read your own data into R, then try to use gage() and 
got an error? We can better help you if we understand your inputs and 
the function you're having trouble with.

Valerie


On 01/13/12 13:10, Javerjung Sandhu wrote:
> Dear List,
> I will highly appreciate your help on this.
> For the GAGE analysis package shown by the link given below:
> http://www.bioconductor.org/packages/release/bioc/html/gage.html
> Could you please tell me how to prepare the Custom INPUT files required for this analysis
> OR
> Send me the SAMPLE DATA files in TXT format so that i know in which format i need to put the data&  how could i DO a BASIC  GAGE analysis using those files. I couldn't figure it out and trying it since 3 weeks or more.
> Best Regards,
> Jung
>
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