[BioC] Standard error and confidence intervals in DESeq?

Wolfgang Huber whuber at embl.de
Tue Feb 28 12:04:59 CET 2012


Dear Nirmala

currently, no.

It is feasible to compute these, though, and we aim to extend the 
package for this within the current calendar year.


	Best wishes
	Wolfgang



Feb/21/12 10:01 PM, Akula, Nirmala (NIH/NIMH) [C] scripsit::
> Hi,
>
>              Is there a way for DESeq to output standard error and confidence intervals in addition to the fold change and p-values?
>
> Thank you.
>
> Regards,
> Nirmala
>
> ------------------------------------------------------------------------------------
> Nirmala Akula, MS, PhD
> Contractor,
> Human Genetics Branch
> NIMH/NIH
> Blg 35, Rm 1A/205
> Bethesda, MD - 20892
> Phone# 301-451-4258
>
>
> 	[[alternative HTML version deleted]]
>
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-- 
Best wishes
	Wolfgang

Wolfgang Huber
EMBL
http://www.embl.de/research/units/genome_biology/huber



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