[BioC] Error in gammaFitEM for library(lumi) [Possible Bug]

[Pan Du]

Thanks! Elodie

It's a bug after I updated the code last time. I have fixed it by
adding an additional parameter "truncate=FALSE" to the gammaFitEM
function. I will upload the change together with many other
methylation related updates at the end of this week.

Pan

> Subject: Re: [BioC] Error in gammaFitEM for library(lumi) [Possible Bug]
> Date: Tue, 14 Feb 2012 08:23:57 +0000
> From: Elodie Chapeaublanc <elodie.chapeaublanc at curie.fr>
> To: <bioconductor at stat.math.ethz.ch>
>
> Hello,

> My name is Elodie Chapeaublanc. I am a Bioinformatician in Institute CURIE at Paris.
> I want to use lumi package in order to preprocess Illumina methylation 27K data.
> When I try to use lumiMethyStatus on matrix data, an error appear  :
> Error in if (truncate) { : argument is not interpretable as logical
> I haven't got error with example.lumiMethy object.
> How can I resolve this error?

> Thanks,

> Elodie