[BioC] SNPlocs package for dbSNP 135
Hervé Pagès
hpages at fhcrc.org
Tue Feb 14 17:22:56 CET 2012
Hi,
I've rolled up a new SNPlocs package, SNPlocs.Hsapiens.dbSNP.20111119,
that contains SNPs ids, locations and alleles, extracted from dbSNP 135:
> library(SNPlocs.Hsapiens.dbSNP.20111119)
> sum(getSNPcount())
[1] 43938303
Its version (0.99.6) and API are exactly the same as for the other
SNPlocs packages. I've postponed the improvements I have on my list
for those packages to the next version (0.99.7). Hopefully that will
happen before the next BioC release.
Cheers,
H.
--
Hervé Pagès
Program in Computational Biology
Division of Public Health Sciences
Fred Hutchinson Cancer Research Center
1100 Fairview Ave. N, M1-B514
P.O. Box 19024
Seattle, WA 98109-1024
E-mail: hpages at fhcrc.org
Phone: (206) 667-5791
Fax: (206) 667-1319
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