[BioC] GenomicRanges requires a IRanges version not available in the repository

[Juan L. Mateo]

Hi all,

I need to install the package htSeqTools from the BioConductor version 
2.10. This package, among others, requires GenomicRanges, but the 
installation of this last fails because it requires a higher version of 
IRanges than the one in the repository.

The error that I get is below:

===================================================================
...
Error : package 'IRanges' 1.13.22 was found, but >= 1.13.23 is required 
by 'GenomicRanges'
ERROR: lazy loading failed for package 'GenomicRanges'
* removing 
'/bwfs/home/grid/mhbw0366/R/x86_64-unknown-linux-gnu-library/2.15/GenomicRanges'

The downloaded source packages are in
     '/tmp/RtmplUtRs3/downloaded_packages'
Warning message:
In install.packages(pkgs = pkgs, repos = repos, ...) :
   installation of package 'GenomicRanges' had non-zero exit status
===================================================================


sessionInfo()


R Under development (unstable) (2012-02-09 r58309)
Platform: x86_64-unknown-linux-gnu (64-bit)

locale:
  [1] LC_CTYPE=en_GB       LC_NUMERIC=C         LC_TIME=en_GB
  [4] LC_COLLATE=en_GB     LC_MONETARY=en_GB    LC_MESSAGES=en_GB
  [7] LC_PAPER=C           LC_NAME=C            LC_ADDRESS=C
[10] LC_TELEPHONE=C       LC_MEASUREMENT=en_GB LC_IDENTIFICATION=C

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base

other attached packages:
[1] BiocInstaller_1.3.7

loaded via a namespace (and not attached):
[1] tools_2.15.0



-- 
=============================
Juan L. Mateo PhD.
Centre for Organismal Studies (COS) - University of Heidelberg
Im Neuenheimer Feld 230
69120 Heidelberg, Germany
Tel: 0049 (0)6221 54 6493
Fax: 0049 (0)6221 54 5639

-- 
=============================
Juan L. Mateo PhD.
Centre for Organismal Studies (COS) - University of Heidelberg
Im Neuenheimer Feld 230
69120 Heidelberg, Germany
Tel: 0049 (0)6221 54 6493
Fax: 0049 (0)6221 54 5639