[BioC] Help baySeq

[Tina Asante Boahene]

Hi all,


This is just a quick question regarding the comparison between the classical and your Bayesian approach.
In bayeseq, what FDR cutoff should I choose if I want to make a comparison with edgeR, where I for example take a 5% cutoff on the adjusted p-values? (in fact, which one did you choose on your bayeseq paper for the real data analysis?)

Thank you.
 

Kind Regards

Tina