[BioC] GenomicFeatures::makeTranscriptDbFromGTF?

Steve Lianoglou mailinglist.honeypot at gmail.com
Thu Feb 9 19:59:30 CET 2012


On Thu, Feb 9, 2012 at 1:55 PM, Tim Triche, Jr. <tim.triche at gmail.com> wrote:
> I'm running bioc-devel (2.10) and R-devel r58079 from SVN, if that makes any
> difference...

I should have said "running at least bioc2.9" .. I think it's only in
2.9 that GenomicRanges objects got the seqinfo slots and, therefore,
the `genome` function ... my release-history-trivia is a bit weak,
though :-)

FWIW, I'm typically on *-devel too ...
(^^ not worth much ...)

-steve

-- 
Steve Lianoglou
Graduate Student: Computational Systems Biology
 | Memorial Sloan-Kettering Cancer Center
 | Weill Medical College of Cornell University
Contact Info: http://cbio.mskcc.org/~lianos/contact



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