[BioC] FDR (False Discovery Rate)
Tina Asante Boahene
ma08tta at brunel.ac.uk
Wed Feb 8 02:34:39 CET 2012
Is it possible to find the FDR of DE genes in baySeq at a set percentage.
Is there a function used in the baySeq vignette to find the FDR at a set percentage.
Example to find the FDR for a topCounts at say 1% within baySeq.
TopCountP<-topCounts(CDPost.Poi, number = 22490, group = 2)
This will give all the FDR for this dataset, however is there a way to just have the result with a pre-set FDR.
Also is there something similar for the DEGseq package.
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