[BioC] RE ChIPPEAKANNO

[Ngeow, Joanne]

Dear Julie,

Thanks. I¹ve attached it in the files. The output I got is shown but I would
like to identify what the peaks are and I am struggling with that as well as
am not sure if I am extracting the info correctly from ensembl for miRNA

Thank you
Joanne 


On 8/27/12 6:25 PM, "Zhu, Lihua (Julie)" <Julie.Zhu at umassmed.edu> wrote:

> Joanne,
> 
> Could you please send us the code snippet and session info? Thanks!
> 
> Best regards,
> 
> Julie
> 
> 
> On 8/27/12 4:00 PM, "Ngeow, Joanne" <ngeowj at ccf.org> wrote:
> 
>> Hi Julie,
>> I was using ChIPPeakAnno and was able to extract the distance to nearest
>> miRNA which is what I am interested in. I am having trouble however going
>> from that step to finding out which are the miRNAs that is being mapped.Can¹t
>> find the answer online/ blogs.  Can you help?
>> 
>> Thank you
>> 
>> Best regards
>> Joanne Ngeow
>> Cancer Genetics Fellow
>> 
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===================================


 Please consider the environment before printing this e-mail

Cleveland Clinic is ranked one of the top hospitals in America by U.S.News & World Report (2012).  
Visit us online at http://www.clevelandclinic.org for a complete listing of our services, staff and locations.


Confidentiality Note:  This message is intended for use only by the individual or entity to which it is addressed and may contain information that is privileged, confidential, and exempt from disclosure under applicable law.  If the reader of this message is not the intended recipient or the employee or agent responsible for delivering the message to the intended recipient, you are hereby notified that any dissemination, distribution or copying of this communication is strictly prohibited.  If you have received this communication in error,  please contact the sender immediately and destroy the material in its entirety, whether electronic or hard copy.  

Thank you.