[BioC] question about edgeR smearPlot
aloraine at gmail.com
Tue Aug 28 23:32:48 CEST 2012
I am writing with a question about edgeR function smearPlot.
I made a smear plot but am seeing rows of orange points below and
above (-5,-5) and (5,5) respectively.
Here are the commands I used to make the plot:
n.shoot = sum(summary(decideTestsDGE(et.shoot,p.value=0.05))[c(1,3),])
abline(h = c(-2, 2), col = "dodgerblue")
In case the attachment doesn't go through I put the plot on-line
(temporarily) at http://vm142-20.iplantcollaborative.org/pl.png/
-------------- next part --------------
A non-text attachment was scrubbed...
Size: 79161 bytes
Desc: not available
More information about the Bioconductor