[BioC] visualization of interactions

[Bogdan Tanasa [guest]]

Dear all,

I would like to represent 2 (chromosomal) interactions as Granges data structure:

let's say :
chr1 1000-1010 site interacting with chr1 5000-5010
chr1 5000-5010 site interacting with chr1 8000-8010

in order to apply the function geom_arch in ggbio for visualization ...

I would appreciate any suggestions in this respect. thanks very much,

Bogdan

 -- output of sessionInfo(): 

ggplot() + geom_arch(int)

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