[BioC] Genominator error when calling syste.time

[Kasper Daniel Hansen]

On Wed, Apr 11, 2012 at 3:32 PM, Boel Brynedal <Boel.Brynedal at ki.se> wrote:
>> eData <- importFromAlignedReads(aligned, chrMap=chroms, dbFilename='test.db', tablename='raw', type="BAM", verbose=FALSE)
> Error in system.time(exp) :
>  Unable to write the table, delete table or specify overwrite.
> In addition: Warning message:
> In value[[3L]](cond) :
>  RS-DBI driver: (error in statement: near "20417.6": syntax error)
> Timing stopped at: 0.076 0 0.081
> Timing stopped at: 12.851 0.74 13.631

The system.time is a red herring I think.  Note that it says
  >  Unable to write the table, delete table or specify overwrite.
I suggest you have too little disk space, or permission issues.

Kasper