[BioC] RE : Gene description

[Simon Noël]

 Someof the annotation you are looking for can be found with EASE, a program from the DAVID web site

http://david.abcc.ncifcrf.gov/ease/ease1.htm

Simon Noël
CdeC
________________________________________
De : bioconductor-bounces at r-project.org [bioconductor-bounces at r-project.org] de la part de James W. MacDonald [jmacdon at med.umich.edu]
Date d'envoi : 30 mars 2011 14:13
À : Mohamed Lajnef
Cc : bioconductor at stat.math.ethz.ch
Objet : Re: [BioC] Gene description

Hi Mohamed,

On 3/30/2011 11:41 AM, Mohamed Lajnef wrote:
> Dear All,
> I'm looking to make a summary of the functionality of a gene
> (ID,name,position,Ch,function,pathways).
> could you please give me some useful informations (packages) to do this
> summary ?

You don't mention the species you are interested in, so assuming Homo
sapiens, you want the org.Hs.eg.db package. For more information, see
the AnnotationDbi vignette here

http://www.bioconductor.org/packages/2.7/bioc/vignettes/AnnotationDbi/inst/doc/AnnotationDbi.pdf

Best,

Jim


>
> Any help would be appreciated
>
> Regrads
>
>
>
>
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James W. MacDonald, M.S.
Biostatistician
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University of Michigan
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